PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G37040.1   methionine aminopeptidase 1D

Lab Annot. methionine aminopeptidase - MAP1D - dual localization plastid & mito
Mapman: 29.5.7.6.1* protein.degradation.metalloprotease.MG.M24
Curated Location mitochondria (Pubmed: 23198870 11060042 )
plastid stroma (Pubmed: 23198870 11060042 )

TAIR curated location: chloroplast15681659
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G13270.1 11Arabidopsis thaliana1E-1333156175226 (126)C
AT3G25740.1 11Arabidopsis thaliana4E-11727661752 (0)C
AT2G45240.1 11Arabidopsis thaliana6E-85283486212 (4)_
Os02g52420.1 7Oryza sativa2E-17837067770 (0)M
Os04g52100.1 7Oryza sativa1E-13628367790 (0)C
Os02g52420.2 7Oryza sativa2E-13521484920 (0)_
Zm00001eb255710_P001 agpv5Zea mays033672840 (0)C
v1_GRMZM2G101438_P01 4a53Zea mays033672840 (0)C
GRMZM2G101438_P01 3.21Zea mays033672842 (2)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_M24(1)
TargetP: Mitochondria (Class 4 C0.311; M0.532; S0.010; _0.032)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 350 aa (-cTP 309)
Molecular Weight 38.53 kDA(-cTP )
PI 7.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
326Detail       leaf [A. thaliana] chloroplast stromawild-type
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1871Detail       Total leaf [A. thaliana] Stroma wild-type
1910Detail       leaf [A. thaliana] total leaf tissue clb19_myc
1912Detail       leaf [A. thaliana] total leaf tissue clb19_myc
2150Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19995723(chloroplast reference proteome)
20733066(ABA effected phosphoproteome)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help