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AT4G36690.4 U2 snRNP auxilliary factor%2C large subunit%2C splicing factor

Lab Annot.

U2 snRNP auxilliary factor, large subunit, splicing factor
Mapman: 27.1.1 RNA.processing.splicing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

PeptideAtlas POGS Uniprot Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G36690.1 11 Arabidopsis thaliana 0 573 96 96 4 (1) _
AT4G36690.2 11 Arabidopsis thaliana 0 506 95 95 4 (1) _
AT4G36690.3 11 Arabidopsis thaliana 0 506 95 95 4 (1) _
Os11g45590.1 7 Oryza sativa 0 406 75 85 5 (5) _
Os11g45590.2 7 Oryza sativa 0 406 75 85 5 (5) _
Os11g41820.1 7 Oryza sativa 0 400 73 84 11 (11) _
Zm00001eb166260_P005 agpv5 Zea mays 0 403 75 86 0 (0) _
v1_GRMZM2G093256_P04 4a53 Zea mays 0 403 75 86 28 (28) _
GRMZM5G813627_P02 3.21 Zea mays 0 403 75 86 70 (28) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Apt1(1) RRM_1(5) RRM_7(2) RRM_occluded(2)
TargetP:	Cytoplasm (Class 1 C0.097; M0.086; S0.034; _0.921)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	551 aa (-cTP 538)
Molecular Weight	60.67 kDA(-cTP )
PI	7.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
20813957(SUMO proteome)

Comparative Proteomics Data