PPDB

The Plant Proteome Database

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AT4G36690.1   U2 snRNP auxilliary factor%2C large subunit%2C splicing factor

Lab Annot. ATU2AF65A; RNA binding
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G36690.2 11Arabidopsis thaliana05061001002 (1)_
AT4G36690.3 11Arabidopsis thaliana050699992 (1)_
AT4G36690.4 11Arabidopsis thaliana057787892 (1)_
Os11g45590.1 7Oryza sativa040675855 (5)_
Os11g45590.2 7Oryza sativa040675855 (5)_
Os11g41820.1 7Oryza sativa0400738411 (11)_
Zm00001eb166260_P005 agpv5Zea mays040375860 (0)_
v1_GRMZM2G093256_P04 4a53Zea mays0403758628 (28)_
GRMZM5G813627_P02 3.21Zea mays0403758628 (28)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(5) RRM_7(2) RRM_occluded(3)
TargetP: Cytoplasm (Class 2 C0.123; M0.072; S0.042; _0.912)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 573 aa (-cTP 560)
Molecular Weight 63.55 kDA(-cTP )
PI 7.75(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

17028151(leaf defense proteome)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
21173025(root proteome)
20813957(SUMO proteome)

Comparative Proteomics Data


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