PPDB

The Plant Proteome Database

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AT4G36600.1   Late embryogenesis abundant (LEA) protein

Lab Annot. late embryogenesis abundant (LEA) protein
Mapman: 35.1.22 not assigned.no ontology.late embryogenesis abundant domain-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G36600.2 11Arabidopsis thaliana03531001000 (0)S
AT2G18340.3 11Arabidopsis thaliana2E-6541645520 (0)S
AT2G18340.1 11Arabidopsis thaliana2E-6543144520 (0)S
Os03g07180.1 7Oryza sativa3E-0723732460 (0)S
Os03g07180.2 7Oryza sativa3E-069440530 (0)S
Os03g07180.3 7Oryza sativa8E-0624133450 (0)S
Zm00001eb005250_P001 agpv5Zea mays4E-1225834470 (0)S
GRMZM2G063287_P01 3.21Zea mays4E-1225834470 (0)S
v1_GRMZM2G063287_P01 4a53Zea mays4E-1225834470 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ApoLp-III(2) LEA_4(9) YtxH(2)
TargetP: Cytoplasm (Class 4 C0.063; M0.274; S0.198; _0.536)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 353 aa (-cTP 322)
Molecular Weight 37.96 kDA(-cTP )
PI 5.30(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18436743(specific to seeds)
19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help