PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G36590.1   MADS-box transcription factor family protein

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G60440.1 11Arabidopsis thaliana3E-7325850650 (0)_
AT1G01530.1 11Arabidopsis thaliana2E-4323939570 (0)M
AT1G65360.1 11Arabidopsis thaliana4E-4223339540 (0)_
Os01g74440.1 7Oryza sativa9E-2516635500 (0)_
Os09g02830.1 7Oryza sativa1E-2314335580 (0)M
Os12g21850.1 7Oryza sativa2E-2316732550 (0)_
GRMZM5G891280_P01 3.21Zea mays1E-2920532490 (0)_
Zm00001eb296470_P001 agpv5Zea mays1E-2920532490 (0)_
v1_GRMZM2G163335_P01 4a53Zea mays1E-2821032490 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5053(2) Gluconate_2-dh3(1) SRF-TF(1)
TargetP: Cytoplasm (Class 2 C0.066; M0.150; S0.028; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 248 aa (-cTP 182)
Molecular Weight 28.47 kDA(-cTP )
PI 9.19(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help