PPDB

 The Plant Proteome Database

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AT4G36250.1   aldehyde dehydrogenase 3F1
Lab Annot. 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) (ALDH3F1)
Mapman: 5.1 fermentation.aldehyde dehydrogenase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G44170.2 11Arabidopsis thaliana8E-163469486739 (31)_
AT1G44170.1 11Arabidopsis thaliana8E-163469486739 (31)_
AT4G34240.1 11Arabidopsis thaliana2E-151471486444 (38)_
Os02g43194.1 7Oryza sativa046852720 (0)_
Os04g45720.1 7Oryza sativa048251723 (3)_
Os02g43280.1 7Oryza sativa0454527310 (10)_
GRMZM2G155502_P03 3.21Zea mays047554730 (0)_
Zm00001eb427610_P001 agpv5Zea mays047554730 (0)_
v1_GRMZM2G169458_P02 4a53Zea mays0471527312 (12)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Aldedh(1)
TargetP: Cytoplasm (Class 2 C0.038; M0.190; S0.098; _0.907)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 484 aa (-cTP 482)
Molecular Weight 53.61 kDA(-cTP )
PI 8.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2253Detail       seedlings [A. thaliana] total tissue atg5
2269Detail       seedlings [A. thaliana] total tissue wild-type
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2288Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2297Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2319Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 16618929(ER-LOPIT-callus)
17432890(leaf total membranes)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help