PPDB

PPDB	The Plant Proteome Database

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AT4G36060.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Lab Annot.

basic helix-loop-helix (bHLH) DNA-binding protein
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family

Curated Location

TAIR curated location: nucleus & cytoplasm15610358

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G36060.2 11 Arabidopsis thaliana 0 257 99 99 0 (0) _
AT4G36060.3 11 Arabidopsis thaliana 0 245 100 100 0 (0) C
AT4G36060.4 11 Arabidopsis thaliana 3E-158 216 99 99 0 (0) _
Os02g23823.1 7 Oryza sativa 1E-43 238 40 57 0 (0) _
Os07g35870.1 7 Oryza sativa 9E-20 126 43 65 0 (0) _
Os07g35870.2 7 Oryza sativa 2E-19 126 43 65 0 (0) S
v1_GRMZM2G114444_P02 4a53 Zea mays 5E-44 104 65 87 0 (0) C
GRMZM2G114444_P02 3.21 Zea mays 5E-44 104 65 87 0 (0) C
Zm00001eb159750_P001 agpv5 Zea mays 5E-44 104 65 87 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	APG6_N(1) CASP_C(1) DivIC(1) FapA(1) HALZ(3) HLH(1) JIP_LZII(3) YabA(1) ZapB(1)
TargetP:	Chloroplast (Class 5 C0.693; M0.043; S0.065; _0.563)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	286 aa (-cTP 241)
Molecular Weight	31.78 kDA(-cTP 27.05)
PI	5.77(-cTP 6.35)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15028209(Total chloroplast)
19334764(plasma membrane (cell culture))
19995723(chloroplast reference proteome)

Comparative Proteomics Data