PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G35905.1   Trm112p-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g30300.1 7Oryza sativa3E-225964830 (0)M
Os10g30300.2 7Oryza sativa3E-225964830 (0)M
Zm00001eb222710_P001 agpv5Zea mays1E-227156730 (0)M
v1_GRMZM2G068149_P01 4a53Zea mays1E-227156730 (0)M
GRMZM2G068149_P01 3.21Zea mays1E-227156730 (0)M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Trm112p(1)
TargetP: Cytoplasm (Class 4 C0.080; M0.241; S0.237; _0.502)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 77 aa (-cTP 52)
Molecular Weight 8.38 kDA(-cTP )
PI 7.68(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help