PPDB

The Plant Proteome Database

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AT4G35890.1   winged-helix DNA-binding transcription factor family protein

Lab Annot. winged-helix DNA-binding transcription factor protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35890.2 11Arabidopsis thaliana04131001000 (0)C
AT5G66100.1 11Arabidopsis thaliana2E-453773755121 (13)C
AT5G21160.1 11Arabidopsis thaliana1E-2082527017 (12)_
Os03g06070.1 7Oryza sativa2E-2618537562 (2)_
Os01g16110.2 7Oryza sativa9E-178445656 (6)_
Os01g16110.1 7Oryza sativa1E-168445656 (6)_
Zm00001eb004290_P002 agpv5Zea mays5E-2413542590 (0)_
Zm00001eb403210_P001 agpv5Zea mays2E-2314437610 (0)_
GRMZM2G140339_P01 3.21Zea mays2E-2213542590 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: La(1)
TargetP: Chloroplast (Class 1 C0.975; M0.102; S0.003; _0.031)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 523 aa (-cTP 466) (-lTP 384)
Molecular Weight 55.84 kDA(-cTP 49.89)(-lTP 42.03)
PI 9.74(-cTP 9.39)(-lTP 9.436)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
19546170(mature pollen grains)
17216043(leaf)
19376835(leaf phosphoproteins)
20706207(contaminants cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help