PPDB

 The Plant Proteome Database

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AT4G35870.1   early-responsive to dehydration stress protein (ERD4)
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G21620.1 11Arabidopsis thaliana2E-1544721390 (0)S
AT4G15430.1 11Arabidopsis thaliana1E-14439223920 (20)S
AT4G15430.2 11Arabidopsis thaliana1E-14439223915 (15)S
Os03g04450.1 7Oryza sativa079662770 (0)_
Os05g51630.1 7Oryza sativa7E-1545422410 (0)S
Os05g51630.2 7Oryza sativa7E-1545422410 (0)S
Zm00001eb402740_P001 agpv5Zea mays079662770 (0)_
GRMZM2G059891_P01 3.21Zea mays079662770 (0)_
v1_GRMZM2G059891_P01 4a53Zea mays079662770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PHM7_cyt(1) RSN1_7TM(3) RSN1_TM(1)
TargetP: Cytoplasm (Class 2 C0.087; M0.032; S0.139; _0.816)
Predotar:
Subcel. Location:
TM-HMM prediction: 9 TMs
Aramemnon: 9 TMs
TAT position:
Length 817 aa (-cTP 803)
Molecular Weight 92.58 kDA(-cTP )
PI 7.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1508Detail        [A. thaliana]  
1586Detail        [A. thaliana]  
1588Detail        [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help