PPDB

PPDB	The Plant Proteome Database

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AT4G35840.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G35840.2 11 Arabidopsis thaliana 5E-166 268 88 88 0 (0) _
AT2G17730.1 11 Arabidopsis thaliana 2E-139 232 85 92 0 (0) C
AT2G17730.2 11 Arabidopsis thaliana 4E-131 222 85 92 0 (0) C
Os10g39770.1 7 Oryza sativa 5E-85 196 60 78 0 (0) _
Os06g50370.1 7 Oryza sativa 3E-71 197 51 71 0 (0) _
Os07g29600.1 7 Oryza sativa 4E-64 190 49 70 0 (0) C
GRMZM2G052344_P03 3.21 Zea mays 5E-77 196 56 73 0 (0) _
v1_GRMZM2G052344_P03 4a53 Zea mays 5E-77 196 56 73 0 (0) _
Zm00001eb022630_P001 agpv5 Zea mays 5E-77 196 56 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Bacteriocin_IIc(1) DUF1269(2) DUF456(2) DUF5518(1) DUF5862(2) FANCL_C(1) FUSC_2(
TargetP:	Cytoplasm (Class 5 C0.392; M0.042; S0.151; _0.516)
Predotar:
Subcel. Location:
TM-HMM prediction:	3 TMs
Aramemnon:	3 TMs
TAT position:
Length	236 aa (-cTP 202)
Molecular Weight	25.45 kDA(-cTP )
PI	6.20(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data