PPDB

The Plant Proteome Database

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AT4G35785.1   RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot. RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35785.4 11Arabidopsis thaliana8E-12420292920 (0)C
AT4G35785.2 11Arabidopsis thaliana2E-961471001000 (0)C
AT4G35785.5 11Arabidopsis thaliana2E-9023081810 (0)C
Os06g50890.4 6Oryza sativa3E-4715855700 (0)C
Os06g50890.2 6Oryza sativa3E-4715855700 (0)C
Os06g50890.5 6Oryza sativa1E-4615056700 (0)C
v1_GRMZM2G152111_P02 4a53Zea mays5E-41150546818 (18)C
v1_GRMZM2G152111_P01 4a53Zea mays5E-41150546818 (18)C
GRMZM2G152111_P02 3.21Zea mays5E-4115054680 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: KAR9(1) RRM_1(1) RRM_5(1) RSRP(1) Transformer(2)
TargetP: Chloroplast (Class 1 C0.992; M0.046; S0.001; _0.060)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 187 aa (-cTP 125)
Molecular Weight 21.74 kDA(-cTP 14.39)
PI 11.73(-cTP 9.74)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help