PPDB

The Plant Proteome Database

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AT4G35670.1   Pectin lyase-like superfamily protein

Lab Annot. Pectin lyase-like
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35670.2 11Arabidopsis thaliana02871001000 (0)C
AT5G27530.1 11Arabidopsis thaliana039469810 (0)_
AT5G44840.1 11Arabidopsis thaliana8E-15639057710 (0)S
Os07g10740.1 7Oryza sativa2E-9139638560 (0)S
Os05g46510.1 7Oryza sativa5E-8937338560 (0)S
Os07g10680.1 7Oryza sativa1E-8835043600 (0)S
GRMZM2G004500_P01 3.21Zea mays3E-9236140610 (0)S
Zm00001eb061830_P001 agpv5Zea mays3E-9236140610 (0)S
v1_GRMZM2G004500_P01 4a53Zea mays3E-9236140610 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_28(1) Pectate_lyase_3(2)
TargetP: Secreted (Class 2 C0.013; M0.020; S0.960; _0.178)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 394 aa (-cTP 366)
Molecular Weight 42.12 kDA(-cTP )
PI 5.38(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help