PPDB

The Plant Proteome Database

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AT4G35650.1   isocitrate dehydrogenase III

Lab Annot. isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative
Mapman: 8.2.4 TCA / org.transformation.other organic acid transformations.IDH
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35260.1 11Arabidopsis thaliana03688390260 (166)M
AT2G17130.1 11Arabidopsis thaliana0368808980 (42)M
AT2G17130.2 11Arabidopsis thaliana0368798880 (42)M
Os02g38200.1 7Oryza sativa037883894 (4)M
Os04g40310.1 7Oryza sativa033987938 (8)_
Os04g40310.2 7Oryza sativa033985928 (8)_
v1_GRMZM2G025366_P01 4a53Zea mays0377808832 (31)M
GRMZM2G025366_P02 3.21Zea mays0377798726 (25)M
Zm00001eb424940_P002 agpv5Zea mays037779870 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Iso_dh(1)
TargetP: Mitochondria (Class 5 C0.487; M0.679; S0.025; _0.013)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 368 aa (-cTP 306)
Molecular Weight 39.96 kDA(-cTP )
PI 7.08(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
19546170(mature pollen grains)
20706207(contaminants cell cycle interactome (cell culture))
19508356(mature pollen grains and pollen tubes)
22060019(phosphoproteome - N-starved seedlings)
21311031(mitochondria)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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