PPDB

 The Plant Proteome Database

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AT4G35470.1   plant intracellular ras group-related LRR 4
Lab Annot. leucine-rich repeat (LRR) protein
Mapman: 35.1 not assigned.no ontology
Curated Location plasma membrane
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35470.2 11Arabidopsis thaliana050599990 (0)_
AT2G17440.1 11Arabidopsis thaliana053770800 (0)_
AT3G26500.1 11Arabidopsis thaliana3E-5524542641 (1)_
Os08g40090.1 7Oryza sativa056555707 (7)_
Os10g42190.1 7Oryza sativa2E-14954447640 (0)_
Os10g42190.2 7Oryza sativa2E-14954447640 (0)_
GRMZM2G055992_P01 3.21Zea mays056655700 (0)_
v1_GRMZM2G055992_P01 4a53Zea mays056655700 (0)_
Zm00001eb035230_P002 agpv5Zea mays056655700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_20(1) LRR_1(9) LRR_4(9) LRR_5(3) LRR_6(9) LRR_8(6) LRR_9(3) RsmF_met
TargetP: Cytoplasm (Class 2 C0.063; M0.177; S0.120; _0.878)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 549 aa (-cTP 512)
Molecular Weight 60.99 kDA(-cTP )
PI 5.52(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2246Detail       seedlings [A. thaliana] total tissue gfs9
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19525416(leaf (wt and clpr4-1 mutant))
19106119(plasma membrane detergent resistent microdomains (DRM))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help