PPDB

 The Plant Proteome Database

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AT4G35460.1   NADPH-dependent thioredoxin reductase B
Lab Annot. AtNTRB- NADPH-dependent thioredoxin reductase 1 - differential transcription sites; dual cytosol & mito
Mapman: 21.1 redox.thioredoxin
Curated Location cytosol (Pubmed: 15642341 )
mitochondria (Pubmed: 15642341 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G17420.1 11Arabidopsis thaliana0374849097 (54)C
AT2G17420.2 11Arabidopsis thaliana035283890 (0)C
AT2G41680.1 11Arabidopsis thaliana2E-1123125172474 (273)C
Os02g48290.1 7Oryza sativa0326778818 (18)M
Os06g22140.1 7Oryza sativa5E-17038069810 (0)M
Os07g46410.1 7Oryza sativa2E-110332506936 (36)M
GRMZM5G841142_P02 3.21Zea mays032677880 (0)M
Zm00001eb281340_P001 agpv5Zea mays032677880 (0)M
v1_GRMZM2G158515_P01 4a53Zea mays3E-18032676880 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: FAD_binding_2(4) FAD_binding_3(2) FAD_oxidored(1) GIDA(4) HI0933_like(3) K_oxyge
TargetP: Chloroplast (Class 5 C0.465; M0.422; S0.010; _0.026)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 375 aa (-cTP 304)
Molecular Weight 39.63 kDA(-cTP 32.34)
PI 6.96(-cTP 5.40)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
356Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
2013Detail       leaf [A. thaliana] total leaf tissue wt
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2247Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

 12938931(Total chloroplast envelope)
19525416(leaf (wt and clpr4-1 mutant))
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)

Comparative Proteomics Data

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