PPDB

PPDB	The Plant Proteome Database

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AT4G35360.1 pantothenate kinase

Lab Annot.

pantothenate kinase protein
Mapman: 18.4.1 Co-factor and vitamine metabolism.pantothenate.pantothenate kinase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G35360.2 11 Arabidopsis thaliana 0 367 100 100 0 (0) _
AT2G17340.1 11 Arabidopsis thaliana 0 366 86 93 124 (82) _
AT2G17320.1 11 Arabidopsis thaliana 0 360 82 92 4 (4) _
Os06g21980.1 7 Oryza sativa 0 364 78 89 15 (15) C
Os06g21980.2 7 Oryza sativa 1E-169 282 80 91 14 (14) _
Os06g21980.3 7 Oryza sativa 2E-135 237 79 91 14 (14) _
v1_GRMZM2G151414_P02 4a53 Zea mays 0 364 78 89 44 (43) C
v1_GRMZM2G151414_P01 4a53 Zea mays 0 364 78 89 44 (43) C
Zm00001eb381870_P002 agpv5 Zea mays 0 364 78 89 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF89(1)
TargetP:	Cytoplasm (Class 4 C0.290; M0.129; S0.077; _0.625)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	367 aa (-cTP 331)
Molecular Weight	41.00 kDA(-cTP )
PI	4.79(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
622	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1519	Detail								leaf [A. thaliana]		wild-type
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data