PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G35310.1   calmodulin-domain protein kinase 5

Lab Annot. calmodulin-dependent protein kinase 5 (CPK5)
Mapman: 30.3 signalling.calcium; 30.1.1 signalling.in sugar and nutrient physiology
Curated Location
TAIR curated location: membrane12068094
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35310.2 11Arabidopsis thaliana05561001000 (0)_
AT2G17290.2 11Arabidopsis thaliana055687930 (0)_
AT2G17290.1 11Arabidopsis thaliana0556879314 (2)_
Os04g49510.1 7Oryza sativa047286930 (0)M
Os02g46090.1 7Oryza sativa047085930 (0)M
Os02g58520.1 7Oryza sativa046478900 (0)_
Zm00001eb428080_P001 agpv5Zea mays055676850 (0)M
GRMZM2G321239_P01 3.21Zea mays047287938 (0)M
v1_GRMZM2G321239_P01 4a53Zea mays047287930 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: APH(2) DUF374(1) DUF5580(2) EF-hand_1(4) EF-hand_11(2) EF-hand_4(2) EF-hand_5(4)
TargetP: Cytoplasm (Class 2 C0.159; M0.065; S0.058; _0.902)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 556 aa (-cTP 510)
Molecular Weight 62.13 kDA(-cTP )
PI 5.15(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
2287Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help