PPDB

The Plant Proteome Database

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AT4G35220.1   Cyclase family protein

Lab Annot. cyclase protein
Mapman: 28.99 DNA.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G44542.1 11Arabidopsis thaliana2E-12626765801 (1)S
AT4G34180.1 11Arabidopsis thaliana2E-125231748677 (59)S
Os08g23100.1 7Oryza sativa2E-132246728510 (10)S
Os08g23100.2 7Oryza sativa2E-132246728510 (10)S
Os09g02270.1 7Oryza sativa5E-11625166780 (0)S
GRMZM2G061702_P01 3.21Zea mays1E-11822672840 (0)S
v1_GRMZM2G061702_P01 4a53Zea mays1E-11822672840 (0)S
Zm00001eb307270_P003 agpv5Zea mays3E-9618673860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cyclase(1)
TargetP: Secreted (Class 1 C0.013; M0.028; S0.979; _0.033)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 272 aa (-cTP 251)
Molecular Weight 29.99 kDA(-cTP )
PI 5.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2250Detail       seedlings [A. thaliana] total tissue atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21173025(root proteome)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


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