PPDB

The Plant Proteome Database

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AT4G35170.1   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41990.1 11Arabidopsis thaliana4E-6529246630 (0)_
AT1G45688.1 11Arabidopsis thaliana5E-4732633490 (0)C
AT5G42860.1 11Arabidopsis thaliana4E-4532232500 (0)C
Os04g59330.1 7Oryza sativa4E-5529537502 (2)C
Os04g35130.1 7Oryza sativa6E-4117444620 (0)_
Os02g44740.1 7Oryza sativa3E-4017640600 (0)C
v1_GRMZM2G331027_P01 4a53Zea mays2E-4521241543 (3)S
Zm00001eb076260_P001 agpv5Zea mays2E-4521241540 (0)S
GRMZM2G331027_P01 3.21Zea mays2E-4521241546 (6)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(1)
TargetP: Chloroplast (Class 5 C0.473; M0.419; S0.009; _0.172)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 299 aa (-cTP 241)
Molecular Weight 33.52 kDA(-cTP 27.19)
PI 8.30(-cTP 7.87)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help