PPDB

PPDB	The Plant Proteome Database

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AT4G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G18750.1 11 Arabidopsis thaliana 4E-172 731 37 58 1 (0) C
AT1G11290.1 11 Arabidopsis thaliana 5E-159 729 35 58 1 (1) C
AT4G33990.2 11 Arabidopsis thaliana 3E-156 793 34 55 0 (0) M
Os03g04390.1 7 Oryza sativa 0 730 48 67 0 (0) C
Os01g10800.1 7 Oryza sativa 9E-166 734 36 57 2 (2) C
Os01g25270.1 7 Oryza sativa 1E-160 750 34 57 0 (0) M
Zm00001eb002930_P001 agpv5 Zea mays 0 812 45 63 0 (0) C
v1_GRMZM2G176523_P01 4a53 Zea mays 4E-174 481 49 70 12 (12) S
GRMZM2G176523_P02 3.21 Zea mays 4E-174 481 49 70 20 (18) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(4) DYW_deaminase(2) PPR(13) PPR_1(14) PPR_2(13) PPR_3(10) PPR_long(5) RNPP_
TargetP:	Chloroplast (Class 5 C0.592; M0.037; S0.109; _0.407)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	804 aa (-cTP 785)
Molecular Weight	90.78 kDA(-cTP 88.65)
PI	8.46(-cTP 8.42)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data