PPDB

The Plant Proteome Database

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AT4G35080.2   high-affinity nickel-transport family protein

Lab Annot. high-affinity nickel-transport protein
Mapman: 34.12 transport.metal
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G35080.1 11Arabidopsis thaliana036592922 (2)C
AT4G35080.3 11Arabidopsis thaliana038986862 (2)C
AT2G16800.1 11Arabidopsis thaliana1E-14838165740 (0)C
Os06g02580.1 7Oryza sativa1E-10525565749 (9)C
Os03g06090.1 7Oryza sativa4E-9326959710 (0)M
Zm00001eb004310_P001 agpv5Zea mays7E-9325162720 (0)C
v1_GRMZM2G141636_P01 4a53Zea mays7E-93251627221 (21)C
GRMZM2G141636_P01 3.21Zea mays7E-93251627222 (22)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HupE_UreJ(2) HupE_UreJ_2(1)
TargetP: Chloroplast (Class 1 C0.950; M0.094; S0.001; _0.037)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 3 TMs
Aramemnon: 5 TMs
TAT position:
Length 336 aa (-cTP 257) (-lTP 206)
Molecular Weight 35.62 kDA(-cTP 27.09)(-lTP 21.82)
PI 9.56(-cTP 8.44)(-lTP 7.739)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2049Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2145Detail       Total leaf [A. thaliana] total soluble stromawt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help