PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G35050.1   Transducin family protein / WD-40 repeat family protein

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G16780.1 11Arabidopsis thaliana041482921 (1)_
AT5G58230.1 11Arabidopsis thaliana3E-153402537021 (3)_
AT2G19520.1 11Arabidopsis thaliana1E-65445324865 (27)_
Os03g43890.1 7Oryza sativa1E-15040753692 (2)_
Os09g36900.1 7Oryza sativa5E-14140053694 (4)_
Os01g51300.2 7Oryza sativa2E-57444314816 (16)_
Zm00001eb050680_P002 agpv5Zea mays2E-14940253690 (0)_
GRMZM2G090217_P03 3.21Zea mays3E-14940252690 (0)_
v1_GRMZM2G090217_P01 4a53Zea mays3E-149402526911 (11)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(5) CAF1C_H4-bd(2) eIF2A(3) WD40(5)
TargetP: Cytoplasm (Class 1 C0.106; M0.069; S0.031; _0.929)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 424 aa (-cTP 356)
Molecular Weight 47.98 kDA(-cTP )
PI 4.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help