PPDB

PPDB	The Plant Proteome Database

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AT4G34910.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

DEAD box RNA helicase (RH16)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G60990.1 11 Arabidopsis thaliana 2E-51 478 30 48 1 (1) _
AT4G16630.1 11 Arabidopsis thaliana 4E-48 395 30 48 0 (0) _
AT2G47330.1 11 Arabidopsis thaliana 2E-45 444 30 48 3 (2) M
Os03g51900.1 7 Oryza sativa 0 589 58 76 0 (0) C
Os12g29660.1 7 Oryza sativa 8E-50 402 32 47 4 (4) _
Os03g46610.1 7 Oryza sativa 1E-46 432 30 48 1 (1) _
Zm00001eb215620_P001 agpv5 Zea mays 0 577 59 73 0 (0) _
v1_GRMZM2G129554_P02 4a53 Zea mays 0 577 59 73 10 (10) _
GRMZM2G129554_P02 3.21 Zea mays 0 577 59 73 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) DUF3886(2) Helicase_C(2) KRAP_IP3R_bind(2) MecA(2) ResIII(2)
TargetP:	Cytoplasm (Class 1 C0.091; M0.101; S0.073; _0.909)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	626 aa (-cTP 609)
Molecular Weight	69.50 kDA(-cTP )
PI	8.86(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data