PPDB

PPDB	The Plant Proteome Database

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AT4G34890.1 xanthine dehydrogenase 1

Lab Annot.

xanthine dehydrogenase 1
Mapman: 23.2 nucleotide metabolism.degradation

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G34900.1 11 Arabidopsis thaliana 0 1350 93 96 1 (0) _
AT4G34900.2 11 Arabidopsis thaliana 0 1269 93 96 0 (0) _
AT4G34900.3 11 Arabidopsis thaliana 0 1133 93 96 0 (0) _
Os03g31550.1 7 Oryza sativa 0 1350 70 82 21 (21) _
Os03g31550.2 7 Oryza sativa 0 1273 69 82 21 (21) _
Os07g18120.1 7 Oryza sativa 4E-164 1381 31 48 0 (0) S
Zm00001eb021020_P002 agpv5 Zea mays 0 1350 69 82 0 (0) _
v1_GRMZM2G050984_P03 4a53 Zea mays 0 1350 69 82 7 (7) _
v1_GRMZM2G050984_P02 4a53 Zea mays 0 1364 69 81 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ald_Xan_dh_C(1) Ald_Xan_dh_C2(1) CO_deh_flav_C(1) DHODB_Fe-S_bind(1) FAD_binding
TargetP:	Cytoplasm (Class 2 C0.064; M0.141; S0.108; _0.893)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1361 aa (-cTP 1345)
Molecular Weight	149.19 kDA(-cTP )
PI	6.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2250	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21693672(wound-regulated leaf proteome (AOS mutant))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data