PPDB

 The Plant Proteome Database

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AT4G34650.1   squalene synthase 2
Lab Annot.
Mapman: 11.8.8 lipid metabolism.exotics (steroids, squalene etc).squalene synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G34640.1 11Arabidopsis thaliana041079895 (5)_
AT4G34640.2 11Arabidopsis thaliana034579890 (0)S
AT4G34650.2 11Arabidopsis thaliana028498990 (0)_
Os03g59040.2 7Oryza sativa038864816 (6)_
Os03g59040.1 7Oryza sativa038864816 (6)_
Os07g10130.1 7Oryza sativa040661770 (0)M
Zm00001eb061440_P001 agpv5Zea mays040364810 (0)_
v1_GRMZM2G029396_P01 4a53Zea mays040364815 (4)_
Zm00001eb061440_P002 agpv5Zea mays039364800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SQS_PSY(2)
TargetP: Cytoplasm (Class 3 C0.036; M0.206; S0.053; _0.753)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 413 aa (-cTP 339)
Molecular Weight 47.18 kDA(-cTP )
PI 8.13(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help