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AT4G34640.1
squalene synthase 1
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| Lab Annot. |
SQS1 (SQUALENE SYNTHASE 1); farnesyl-diphosphate farnesyltransferase
Mapman: 11.8.8 lipid metabolism.exotics (steroids, squalene etc).squalene synthase |
| Curated Location |
TAIR curated location: endoplasmic reticulum membrane9363754 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
DUF3829(1) SQS_PSY(2) |
| TargetP: |
Cytoplasm (Class 2 C0.087; M0.151; S0.029; _0.823) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
1 TMs |
| Aramemnon: |
2 TMs |
| TAT position: |
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| Length |
410 aa (-cTP 369) |
| Molecular Weight |
47.14 kDA(-cTP ) |
| PI |
6.18(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 1408 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 2245 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2250 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
| 2251 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | wild-type |
| 2253 | Detail | | | | | | | | seedlings [A. thaliana] | total tissue | atg5 |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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16618929(ER-LOPIT-callus)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
21173025(root proteome)
21988472(vacuole (unfiltered data))
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Comparative Proteomics Data
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