PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G34590.1   G-box binding factor 6

Lab Annot.
Mapman: 27.3.35 RNA.regulation of transcription.bZIP transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G75390.1 11Arabidopsis thaliana1E-4816453690 (0)C
AT2G18160.1 11Arabidopsis thaliana6E-3515146650 (0)C
AT1G75390.2 11Arabidopsis thaliana6E-339961740 (0)C
Os02g03960.1 7Oryza sativa1E-328565810 (0)C
Os08g26880.1 7Oryza sativa5E-2412643670 (0)C
Os09g13570.1 7Oryza sativa3E-229651750 (0)C
v1_GRMZM2G444748_P01 4a53Zea mays3E-319757760 (0)C
v1_GRMZM2G444748_P02 4a53Zea mays3E-319757760 (0)C
Zm00001eb231360_P001 agpv5Zea mays3E-319757760 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BioW(1) bZIP_1(2) bZIP_2(2) bZIP_Maf(2) Cep57_CLD_2(2) DUF4140(1) DUF4200(2) Fla
TargetP: Chloroplast (Class 2 C0.950; M0.041; S0.013; _0.255)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 159 aa (-cTP 118)
Molecular Weight 18.04 kDA(-cTP 13.46)
PI 5.38(-cTP 4.69)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1091Detail        [A. thaliana] R4Strep Complemented

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help