PPDB

The Plant Proteome Database

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AT4G34260.1   1%2C2-alpha-L-fucosidase

Lab Annot. catalytic
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os10g19880.1 7Oryza sativa083354703 (3)_
Os10g19334.1 7Oryza sativa081355720 (0)_
Os10g19334.2 7Oryza sativa071356730 (0)_
Zm00001eb027590_P001 agpv5Zea mays066851680 (0)_
GRMZM2G019673_P04 3.21Zea mays049159760 (0)_
v1_GRMZM2G019673_P04 4a53Zea mays049159760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5703_N(2) Glyco_hyd_65N_2(1)
TargetP: Secreted (Class 1 C0.094; M0.010; S0.901; _0.029)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 843 aa (-cTP 808)
Molecular Weight 93.72 kDA(-cTP )
PI 6.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1596Detail        [A. thaliana]  
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2217Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2252Detail       seedlings [A. thaliana] total tissue gfs9
2286Detail        [A. thaliana] Clp C1 WT
2288Detail        [A. thaliana] Clp C1 WT
2289Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2304Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18324730(apoplast leaf)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help