PPDB

 The Plant Proteome Database

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AT4G34240.1   aldehyde dehydrogenase 3I1
Lab Annot. aldehyde dehydrogenase (ALDH3); 3-chloroallyl aldehyde dehydrogenase
Mapman: 5.1 fermentation.aldehyde dehydrogenase
Curated Location envelope (Pubmed: 23198870 17080931 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G34240.4 11Arabidopsis thaliana053399990 (0)M
AT4G34240.3 11Arabidopsis thaliana04081001000 (0)_
AT4G34240.2 11Arabidopsis thaliana039010010027 (23)_
Os11g08300.1 7Oryza sativa047761802 (2)_
Os12g07810.1 7Oryza sativa047058760 (0)M
Os11g08300.2 7Oryza sativa039463812 (2)S
Zm00001eb201330_P001 agpv5Zea mays047163800 (0)M
GRMZM2G103546_P01 3.21Zea mays046558750 (0)C
v1_GRMZM2G103546_P01 4a53Zea mays046558750 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Aldedh(1) DUF1133(1) LuxC(1) YkuI_C(1)
TargetP: Cytoplasm (Class 5 C0.264; M0.155; S0.040; _0.295)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 550 aa (-cTP 491)
Molecular Weight 60.17 kDA(-cTP )
PI 8.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
356Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
875Detail       leaf [A. thaliana] chloroplast stromawild-type
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1260Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 1) thylakoid membranewild-type
1262Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 2) thylakoid membranewild-type
1331Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1332Detail       leaf [A. thaliana] chloroplast thylakoid membraneshoot1
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1627Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopeWild-type
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1934Detail       leaf [A. thaliana] chloroplast wild-type
1984Detail       leaf [A. thaliana] plastid wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
2132Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2313Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 15028209(Total chloroplast)
18463617(suspension cells-phosphorylated proteins)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help