PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G34230.1 cinnamyl alcohol dehydrogenase 5

Lab Annot.

cinnamyl-alcohol dehydrogenase (CAD5)
Mapman: 16.2.1.10 secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G34230.2 11 Arabidopsis thaliana 0 357 99 99 21 (17) _
AT3G19450.1 11 Arabidopsis thaliana 0 356 79 89 176 (130) _
AT4G39330.1 11 Arabidopsis thaliana 6E-124 349 50 70 391 (242) _
Os02g09490.1 7 Oryza sativa 6E-172 356 73 85 8 (8) _
Os04g15920.1 7 Oryza sativa 7E-112 350 46 67 0 (0) _
Os10g29470.1 7 Oryza sativa 1E-111 351 49 67 5 (5) _
Zm00001eb234730_P001 agpv5 Zea mays 1E-161 355 73 85 0 (0) M
v1_GRMZM2G110175_P01 4a53 Zea mays 1E-161 355 73 85 21 (21) M
GRMZM5G844562_P01 3.21 Zea mays 1E-161 355 73 85 31 (31) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	2-Hacid_dh_C(1) ADH_N(1) adh_short(2) ADH_zinc_N(1) ADH_zinc_N_2(1) AlaDh_PNT_C(
TargetP:	Cytoplasm (Class 3 C0.115; M0.217; S0.063; _0.748)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	357 aa (-cTP 353)
Molecular Weight	38.74 kDA(-cTP )
PI	5.42(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)
1541	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	M-48
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2399	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18814325(cotyledons)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data