PPDB

The Plant Proteome Database

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AT4G34210.1   SKP1-like 11

Lab Annot. SKP1-like 11
Mapman: 29.5.11.4.3.1 protein.degradation.ubiquitin.E3.SCF.SKP
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G34470.1 11Arabidopsis thaliana1E-10715298980 (0)S
AT1G75950.1 11Arabidopsis thaliana5E-75160728354 (28)_
AT3G21860.1 11Arabidopsis thaliana2E-7415271780 (0)_
Os09g36830.1 7Oryza sativa6E-63169627217 (17)_
Os11g26910.1 7Oryza sativa3E-59166667556 (56)_
Os08g28820.1 7Oryza sativa2E-5715953720 (0)_
Zm00001eb229260_P001 agpv5Zea mays8E-6115764770 (0)_
v1_GRMZM2G074282_P06 4a53Zea mays8E-61157647710 (10)_
GRMZM2G074282_P04 3.21Zea mays8E-61157647715 (15)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Peptidase_C30(1) Skp1(2) Skp1_POZ(1)
TargetP: Secreted (Class 5 C0.103; M0.043; S0.682; _0.566)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 152 aa (-cTP 123)
Molecular Weight 17.29 kDA(-cTP )
PI 4.30(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help