PPDB

The Plant Proteome Database

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AT4G34150.1   Calcium-dependent lipid-binding (CaLB domain) family protein

Lab Annot. C2 domain calcium-dependent protein kinase
Mapman: 30.3 signalling.calcium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09070.1 11Arabidopsis thaliana2E-1127027435 (2)_
AT3G55470.2 11Arabidopsis thaliana6E-1011329530 (0)_
AT1G63220.1 11Arabidopsis thaliana5E-099131531 (1)_
Os06g43190.1 7Oryza sativa4E-5630940480 (0)_
Os02g42710.1 7Oryza sativa4E-129134600 (0)_
Os01g62430.3 7Oryza sativa1E-1014129480 (0)_
Zm00001eb387300_P002 agpv5Zea mays9E-5526345550 (0)_
GRMZM2G704277_P02 3.21Zea mays9E-5526345550 (0)_
Zm00001eb387300_P001 agpv5Zea mays1E-5426245550 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: C2(1)
TargetP: Cytoplasm (Class 3 C0.084; M0.099; S0.153; _0.693)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 247 aa (-cTP 211)
Molecular Weight 27.05 kDA(-cTP )
PI 6.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data


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