PPDB

The Plant Proteome Database

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AT4G33880.1   ROOT HAIR DEFECTIVE 6-LIKE 2

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G14760.1 11Arabidopsis thaliana5E-12935962690 (0)_
AT2G14760.3 11Arabidopsis thaliana4E-12537260670 (0)_
AT2G14760.2 11Arabidopsis thaliana9E-7729355630 (0)_
Os12g39850.1 7Oryza sativa9E-508590970 (0)_
Os07g39940.1 7Oryza sativa6E-4811971780 (0)_
Os03g42100.1 7Oryza sativa5E-4718949620 (0)_
Zm00001eb108190_P001 agpv5Zea mays2E-4711870770 (0)_
v1_GRMZM2G383841_P01 4a53Zea mays2E-4711870770 (0)_
GRMZM2G383841_P01 3.21Zea mays2E-4711870770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FAM176(1) HLH(2)
TargetP: Cytoplasm (Class 2 C0.098; M0.090; S0.067; _0.853)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 352 aa (-cTP 287)
Molecular Weight 38.77 kDA(-cTP )
PI 4.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help