PPDB

PPDB	The Plant Proteome Database

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AT4G33630.1 UvrB/UvrC domain protein (DUF3506)

Lab Annot.

Executer 1 (EXE1)
Mapman: 30.15* signalling.ROS

Curated Location

thylakoid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G33630.2 11 Arabidopsis thaliana 0 684 100 100 222 (30) C
AT4G33630.3 11 Arabidopsis thaliana 0 684 100 100 0 (0) C
AT1G27510.1 11 Arabidopsis thaliana 8E-112 590 38 57 333 (50) C
Os10g34400.1 7 Oryza sativa 1E-141 673 38 57 0 (0) C
Os10g34400.2 7 Oryza sativa 1E-141 673 38 57 0 (0) C
Os01g01790.1 7 Oryza sativa 4E-106 601 37 53 8 (8) C
GRMZM2G048435_P02 3.21 Zea mays 1E-134 731 37 55 0 (0) C
Zm00001eb221310_P004 agpv5 Zea mays 1E-134 731 37 55 0 (0) C
Zm00001eb221310_P001 agpv5 Zea mays 1E-134 731 37 55 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3506(1) Hexokinase_1(1) UVR(2)
TargetP:	Chloroplast (Class 1 C0.989; M0.157; S0.002; _0.013)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	684 aa (-cTP 638)
Molecular Weight	76.53 kDA(-cTP 71.62)
PI	5.16(-cTP 5.00)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1365	Detail								[A. thaliana]	chloroplast fractionation
1366	Detail								[A. thaliana]	chloroplast fractionation
1367	Detail								[A. thaliana]	chloroplast fractionation
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
2152	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep
2289	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2305	Detail								[A. thaliana]		Clp C1 TRAP
2306	Detail								[A. thaliana]		Clp C1 TRAP
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19995723(chloroplast reference proteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21515685(GreenCut2)

Comparative Proteomics Data