PPDB

PPDB	The Plant Proteome Database

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AT4G33625.1 vacuole protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G33625.2 11 Arabidopsis thaliana 3E-143 200 99 99 9 (9) _
AT4G33625.3 11 Arabidopsis thaliana 6E-108 150 100 100 0 (0) _
Os07g02710.1 7 Oryza sativa 5E-73 167 69 85 0 (0) C
v1_GRMZM2G173721_P04 4a53 Zea mays 2E-69 151 64 81 1 (1) C
v1_GRMZM2G119815_P04 4a53 Zea mays 2E-69 151 64 81 1 (1) C
GRMZM2G173721_P04 3.21 Zea mays 2E-69 151 64 81 1 (1) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_11_kDa(3) CcmD(3) COPI_assoc(1) DUF973(1) PGG(2) Selenoprotein_S(1) YjcB(
TargetP:	Cytoplasm (Class 2 C0.183; M0.096; S0.018; _0.955)
Predotar:
Subcel. Location:
TM-HMM prediction:	4 TMs
Aramemnon:	3 TMs
TAT position:
Length	200 aa (-cTP 165)
Molecular Weight	22.61 kDA(-cTP )
PI	5.80(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1402	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2019	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17151019(vacuole - suspension cell)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data