PPDB

PPDB	The Plant Proteome Database

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AT4G33565.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G72220.1 11 Arabidopsis thaliana 6E-37 203 40 56 0 (0) _
AT5G10380.1 11 Arabidopsis thaliana 3E-33 185 40 54 0 (0) M
AT3G03550.1 11 Arabidopsis thaliana 2E-30 297 33 51 0 (0) _
Os09g29370.1 7 Oryza sativa 9E-30 183 37 54 0 (0) _
Os04g50100.1 7 Oryza sativa 1E-28 145 44 57 0 (0) _
Os04g37740.1 7 Oryza sativa 2E-27 96 50 65 0 (0) _
GRMZM2G037627_P01 3.21 Zea mays 6E-31 224 36 51 0 (0) _
Zm00001eb315620_P001 agpv5 Zea mays 6E-31 224 36 51 0 (0) _
v1_GRMZM2G037627_P01 4a53 Zea mays 6E-31 224 36 51 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cadherin_C_2(1) FANCL_C(1) Gamma-thionin(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1)
TargetP:	Cytoplasm (Class 1 C0.030; M0.084; S0.086; _0.974)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:
TAT position:
Length	367 aa (-cTP 345)
Molecular Weight	42.18 kDA(-cTP )
PI	5.71(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)

Comparative Proteomics Data