PPDB

 The Plant Proteome Database

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AT4G33520.1   P-type ATP-ase 1
Lab Annot. PAA1 - copper transport envelope
Mapman: 34.12 transport.metal
Curated Location envelope-inner (Pubmed: 23198870 18431481 )

TAIR curated location: chloroplast envelope15772282
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G33520.4 11Arabidopsis thaliana6E-1592241001000 (0)C
AT4G33520.2 11Arabidopsis thaliana2E-153235969745 (36)C
AT4G33520.3 11Arabidopsis thaliana2E-153235969745 (36)C
Os03g27040.1 7Oryza sativa2E-297661810 (0)C
Os08g37950.1 7Oryza sativa2E-287864800 (0)C
Os07g43040.1 7Oryza sativa1E-2275566929 (29)C
Zm00001eb392420_P001 agpv5Zea mays2E-318164770 (0)C
GRMZM2G000219_P01 3.21Zea mays2E-3181647736 (35)C
v1_GRMZM2G000219_P01 4a53Zea mays2E-3181647735 (35)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: HMA(1)
TargetP: Chloroplast (Class 2 C0.802; M0.028; S0.005; _0.182)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon: 7 TMs
TAT position:
Length 237 aa (-cTP 223)
Molecular Weight 24.01 kDA(-cTP 22.56)
PI 8.93(-cTP 8.96)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
151Detail       leaf [A. thaliana] chloroplast stromawild-type
303Detail       leaf [A. thaliana] chloroplast stromawild-type
326Detail       leaf [A. thaliana] chloroplast stromawild-type
339Detail       leaf [A. thaliana] chloroplast stromawild-type
622Detail       leaf [A. thaliana] total leaf tissue wild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2021Detail       leaf [A. thaliana] total leaf tissue  
2112Detail       leaf [A. thaliana] Stroma stromawt
2113Detail       leaf [A. thaliana] Stroma stromawt
2114Detail       leaf [A. thaliana] Stroma stromawt
2310Detail       leaf [A. thaliana] PG plastoglobule 
2316Detail       leaf [A. thaliana] PG plastoglobule 
2317Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 16207701(chloroplast stroma)
18431481(chloroplast)
17216043(leaf)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help