PPDB

 The Plant Proteome Database

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AT4G33470.1   histone deacetylase 14
Lab Annot. lysine deacetylase (also named HDA14 - histone deacetylase 14)
Mapman: 27.3.55 RNA.regulation of transcription.HDA
Curated Location plastid (Pubmed: 29061669 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G61060.2 11Arabidopsis thaliana2E-4634932490 (0)_
AT5G61060.1 11Arabidopsis thaliana4E-4634932490 (0)_
AT3G18520.1 11Arabidopsis thaliana1E-4231734520 (0)_
Os12g08220.1 7Oryza sativa039568810 (0)M
Os07g41090.3 7Oryza sativa5E-4834835510 (0)_
Os07g41090.1 7Oryza sativa8E-4734835510 (0)_
Zm00001eb148900_P002 agpv5Zea mays037469840 (0)M
Zm00001eb148900_P001 agpv5Zea mays037469840 (0)M
GRMZM2G456473_P01 3.21Zea mays037469840 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Hist_deacetyl(1)
TargetP: Chloroplast (Class 2 C0.768; M0.118; S0.011; _0.138)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 423 aa (-cTP 378) (-lTP 330)
Molecular Weight 45.58 kDA(-cTP 40.66)(-lTP 35.53)
PI 6.19(-cTP 5.45)(-lTP 5.287)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
2060Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2061Detail       Total leaf [A. thaliana] chloroplast stromawt and cgep
2064Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2073Detail       Total leaf [A. thaliana] total soluble wt & prep1xprep2xclpt1xclpt2*
2078Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2079Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2081Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2082Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2
2141Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2142Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2143Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2144Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2147Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2149Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2150Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2151Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2152Detail       Total leaf [A. thaliana] total soluble stromawt & cgep
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2305Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP
2398Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/35SRecA-GFP

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
20423899(chloroplast)

Comparative Proteomics Data

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