PPDB

PPDB	The Plant Proteome Database

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AT4G33440.1 Pectin lyase-like superfamily protein

Lab Annot.

Pectin lyase-like superprotein
Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G62110.1 11 Arabidopsis thaliana 1E-157 396 56 74 70 (41) S
AT3G62110.2 11 Arabidopsis thaliana 1E-157 396 56 74 0 (0) S
AT4G23820.1 11 Arabidopsis thaliana 1E-156 438 53 69 29 (5) S
Os08g01600.1 7 Oryza sativa 0 423 64 79 0 (0) M
Os07g14160.1 7 Oryza sativa 4E-153 401 53 70 0 (0) S
Os05g50960.1 7 Oryza sativa 1E-152 396 54 69 0 (0) S
GRMZM2G004435_P02 3.21 Zea mays 0 459 59 75 0 (0) _
Zm00001eb260050_P001 agpv5 Zea mays 0 459 59 75 0 (0) _
v1_GRMZM2G004435_P02 4a53 Zea mays 0 459 59 75 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) Glyco_hydro_28(1) Pectate_lyase_3(3) Pectate_lyase_4(1)
TargetP:	Secreted (Class 4 C0.033; M0.079; S0.570; _0.250)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	475 aa (-cTP 419)
Molecular Weight	52.20 kDA(-cTP )
PI	6.80(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data