PPDB

The Plant Proteome Database

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AT4G33400.1   Vacuolar import/degradation%2C Vid27-related protein

Lab Annot. Vacuolar import/degradation, Vid27-related protein
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G19240.1 11Arabidopsis thaliana059364793 (3)_
Os02g54780.1 7Oryza sativa065457710 (0)_
Os02g08190.1 7Oryza sativa060260757 (7)_
v1_GRMZM2G363474_P02 4a53Zea mays0666587220 (20)_
GRMZM2G363474_P01 3.21Zea mays066658724 (4)_
Zm00001eb206560_P001 agpv5Zea mays066658720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Spt5_N(2) VID27(1) WD40(2)
TargetP: Cytoplasm (Class 1 C0.044; M0.143; S0.058; _0.946)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 645 aa (-cTP 565)
Molecular Weight 71.63 kDA(-cTP )
PI 5.17(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help