PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G33370.1 DEA(D/H)-box RNA helicase family protein

Lab Annot.

DEAD box RNA helicase (RH43)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G51280.1 11 Arabidopsis thaliana 0 587 80 85 3 (3) _
AT1G55150.1 11 Arabidopsis thaliana 9E-101 418 40 60 20 (0) _
AT1G55150.2 11 Arabidopsis thaliana 3E-100 418 40 60 0 (0) _
Os02g05660.1 7 Oryza sativa 0 499 79 89 0 (0) _
Os06g48210.1 7 Oryza sativa 0 529 71 84 0 (0) _
Os01g10050.1 7 Oryza sativa 2E-102 420 41 60 4 (4) M
Zm00001eb394960_P002 agpv5 Zea mays 0 534 75 85 0 (0) C
GRMZM2G043724_P01 3.21 Zea mays 0 534 75 85 0 (0) C
v1_GRMZM2G043724_P01 4a53 Zea mays 0 534 75 85 15 (15) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) Helicase_C(2) ResIII(1) SecA_DEAD(1) zf-CCHC(2)
TargetP:	Cytoplasm (Class 2 C0.211; M0.072; S0.099; _0.898)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	542 aa (-cTP 525)
Molecular Weight	60.26 kDA(-cTP )
PI	6.59(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data