PPDB

The Plant Proteome Database

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AT4G33220.1   pectin methylesterase 44

Lab Annot. pectinesterase
Mapman: 10.8.99 cell wall.pectin*esterases.misc
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G33220.2 11Arabidopsis thaliana04041001000 (0)_
AT3G43270.1 11Arabidopsis thaliana052562776 (6)S
AT3G05620.1 11Arabidopsis thaliana4E-15047048640 (0)S
Os08g34900.1 7Oryza sativa2E-17551950670 (0)S
Os07g47830.1 7Oryza sativa5E-14546348630 (0)S
Os01g21034.1 7Oryza sativa1E-137435486518 (18)_
v1_GRMZM2G175499_P01 4a53Zea mays4E-17551650660 (0)S
Zm00001eb177120_P001 agpv5Zea mays4E-17551650660 (0)S
GRMZM2G175499_P01 3.21Zea mays4E-17551650660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pectate_lyase_3(2) Pectinesterase(1) PMEI(1)
TargetP: Secreted (Class 2 C0.013; M0.018; S0.919; _0.142)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 525 aa (-cTP 439)
Molecular Weight 58.50 kDA(-cTP )
PI 6.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


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