PPDB

The Plant Proteome Database

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AT4G33210.1   F-box family protein

Lab Annot. F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G15475.1 11Arabidopsis thaliana1E-1544424450 (0)_
AT5G25350.1 11Arabidopsis thaliana9E-1429824410 (0)_
AT2G25490.1 11Arabidopsis thaliana1E-1249224410 (0)_
Os10g25680.1 7Oryza sativa082359750 (0)_
Os06g40360.1 7Oryza sativa5E-1847725430 (0)_
Os11g42160.1 7Oryza sativa3E-1748227410 (0)_
GRMZM2G040182_P01 3.21Zea mays066454700 (0)_
GRMZM2G150169_P01 3.21Zea mays074446600 (0)_
Zm00001eb048660_P003 agpv5Zea mays081259760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(3) F-box-like(1) LRR_4(17) LRR_6(16) LRR_8(13)
TargetP: Cytoplasm (Class 2 C0.116; M0.061; S0.096; _0.907)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 990 aa (-cTP 928)
Molecular Weight 108.90 kDA(-cTP )
PI 5.01(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2250Detail       seedlings [A. thaliana] total tissue atg5
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help