PPDB

PPDB	The Plant Proteome Database

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AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G16480.1 11 Arabidopsis thaliana 0 945 32 53 0 (0) M
AT5G09950.2 11 Arabidopsis thaliana 0 979 34 55 0 (0) M
AT5G09950.3 11 Arabidopsis thaliana 0 979 34 55 0 (0) M
Os01g10800.1 7 Oryza sativa 0 959 33 53 2 (2) C
Os09g07780.1 7 Oryza sativa 0 836 36 56 0 (0) M
Os01g25270.1 7 Oryza sativa 0 836 37 56 0 (0) M
GRMZM2G163396_P01 3.21 Zea mays 0 875 36 54 0 (0) M
Zm00001eb183560_P001 agpv5 Zea mays 0 875 36 54 0 (0) M
v1_GRMZM2G163396_P01 4a53 Zea mays 0 875 36 54 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(3) DYW_deaminase(1) PPR(15) PPR_1(10) PPR_2(14) PPR_3(10) PPR_long(6) TPR_1
TargetP:	Chloroplast (Class 2 C0.779; M0.095; S0.023; _0.012)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	990 aa (-cTP 943)
Molecular Weight	110.81 kDA(-cTP 105.65)
PI	6.61(-cTP 6.24)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data