PPDB

The Plant Proteome Database

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AT4G33170.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot. pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G09950.1 11Arabidopsis thaliana097934550 (0)M
AT5G09950.3 11Arabidopsis thaliana097934550 (0)M
AT5G09950.2 11Arabidopsis thaliana097934550 (0)M
Os01g25270.1 7Oryza sativa083637560 (0)M
Os09g07780.1 7Oryza sativa083636560 (0)M
Os01g10800.1 7Oryza sativa095933532 (2)C
v1_GRMZM2G163396_P01 4a53Zea mays087536540 (0)M
Zm00001eb183560_P001 agpv5Zea mays087536540 (0)M
GRMZM2G163396_P01 3.21Zea mays087536540 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AEP1(3) DYW_deaminase(1) PPR(15) PPR_1(10) PPR_2(14) PPR_3(10) PPR_long(6) TPR_1
TargetP: Chloroplast (Class 2 C0.779; M0.095; S0.023; _0.012)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 990 aa (-cTP 943)
Molecular Weight 110.81 kDA(-cTP 105.65)
PI 6.61(-cTP 6.24)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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