PPDB

PPDB	The Plant Proteome Database

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AT4G33150.1 lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme

Lab Annot.

LKR (SACCHAROPINE DEHYDROGENASE)
Mapman: 13.2.3.5 amino acid metabolism.degradation.aspartate family.lysine

Curated Location

TAIR curated location: cytosol & cytoplasm11080311

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G33150.2 11 Arabidopsis thaliana 0 1064 100 100 15 (10) _
AT4G33150.4 11 Arabidopsis thaliana 0 1064 100 100 0 (0) _
AT4G33150.3 11 Arabidopsis thaliana 0 482 100 100 10 (6) M
Os02g54254.1 7 Oryza sativa 0 1079 65 78 0 (0) _
Os02g54254.2 7 Oryza sativa 0 1079 63 77 0 (0) _
Os02g54254.3 7 Oryza sativa 0 533 72 84 0 (0) _
Zm00001eb192910_P002 agpv5 Zea mays 0 800 60 76 0 (0) _
Zm00001eb192910_P001 agpv5 Zea mays 0 787 60 76 0 (0) _
v1_GRMZM2G181362_P05 4a53 Zea mays 0 674 66 79 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AlaDh_PNT_C(2) AlaDh_PNT_N(1) Saccharop_dh_N(1) Sacchrp_dh_C(1) Sacchrp_dh_NADP(
TargetP:	Cytoplasm (Class 3 C0.238; M0.126; S0.045; _0.826)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1064 aa (-cTP 1009)
Molecular Weight	117.16 kDA(-cTP )
PI	5.67(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2286	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data