PPDB

 The Plant Proteome Database

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AT4G33110.1   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Lab Annot. S-adenosyl-L-methionine-dependent methyltransferases
Mapman: 11.3.10 lipid metabolism.Phospholipid synthesis.(S)-coclaurine-N-methyltransferase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G33110.2 11Arabidopsis thaliana035510010023 (23)_
AT4G33120.1 11Arabidopsis thaliana035590940 (0)_
AT3G23530.1 11Arabidopsis thaliana4E-2331126462 (2)S
Os06g37610.1 7Oryza sativa7E-17833973864 (4)M
Os06g37610.2 7Oryza sativa4E-10423170832 (2)M
Os07g29220.1 7Oryza sativa2E-2228326458 (8)M
Zm00001eb385240_P003 agpv5Zea mays035271840 (0)C
GRMZM2G005886_P01 3.21Zea mays035271849 (9)C
v1_GRMZM2G005886_P01 4a53Zea mays035271844 (4)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CMAS(1) DUF938(1) GidB(1) Methyltr_RsmB-F(1) Methyltransf_11(1) Methyltransf_12(
TargetP: Cytoplasm (Class 4 C0.046; M0.124; S0.222; _0.521)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 355 aa (-cTP 312)
Molecular Weight 41.23 kDA(-cTP )
PI 6.44(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1122Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1123Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1125Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1618Detail        [A. thaliana] m48
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2250Detail       seedlings [A. thaliana] total tissue atg5
2599Detail       Rosettes [A. thaliana] total leaf tissue fmtclpc1
2600Detail       rosettes [A. thaliana] total leaf tissue fmtclpc1
2601Detail       Rosettes [A. thaliana] total leaf tissue fmtclpc1
2602Detail       Rosettes [A. thaliana] total leaf tissue clpc1
2603Detail       Rosettes [A. thaliana] total leaf tissue clpc1
2604Detail       Rosettes [A. thaliana] Total leaf tissue clpc1

* For details about the exprimental sources click here.

Published Proteomics Data

 17151019(vacuole - suspension cell)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
21988472(vacuole (unfiltered data))
21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help