PPDB

The Plant Proteome Database

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AT4G32960.1   BRISC/BRCA1-A complex protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G32970.1 11Arabidopsis thaliana2E-12125768790 (0)_
Os06g05720.1 7Oryza sativa3E-9427050686 (6)_
GRMZM2G047204_P01 3.21Zea mays5E-89267486713 (13)_
Zm00001eb270840_P001 agpv5Zea mays5E-8926748670 (0)_
v1_GRMZM2G047204_P01 4a53Zea mays5E-89267486721 (21)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AfsA(1) LDcluster4(1)
TargetP: Cytoplasm (Class 2 C0.018; M0.227; S0.032; _0.926)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 264 aa (-cTP 249)
Molecular Weight 29.42 kDA(-cTP )
PI 6.66(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help