PPDB

The Plant Proteome Database

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AT4G32930.1   hypothetical protein

Lab Annot. unknown protein DUF866 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G32930.2 11Arabidopsis thaliana2E-12017595958 (5)_
Os01g38480.1 7Oryza sativa2E-6716759706 (6)_
Os01g38480.3 7Oryza sativa7E-5412860726 (6)_
Os01g38480.2 7Oryza sativa5E-4416747556 (6)_
GRMZM2G090619_P01 3.21Zea mays2E-6916761733 (3)_
Zm00001eb159830_P002 agpv5Zea mays2E-6916761730 (0)_
v1_GRMZM2G090619_P01 4a53Zea mays2E-6916761732 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF866(1)
TargetP: Cytoplasm (Class 4 C0.166; M0.084; S0.211; _0.570)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 167 aa (-cTP 75)
Molecular Weight 18.47 kDA(-cTP )
PI 4.76(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


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